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Clostridioides difficile
Spore-forming Gram-positive bacilli
Identification & Growth
Identification
- Strict anaerobe, subterminal spore
- Routine diagnosis by GDH plus toxin A/B testing, with confirmatory PCR
Growth Conditions
- CCFA agar (cycloserine-cefoxitin-fructose): yellow colonies with a horse-manure odour and fluorescence
- Anaerobic incubation, 35 °C, 48 h
Clinical Significance
- Antibiotic-associated diarrhea and pseudomembranous colitis in hospitalized patients
Intrinsic Resistance
- Cephalosporins, aztreonam, aminoglycosides
Bench Alerts
- Do not test formed stools or repeat testing for test-of-cure
- An isolated culture without toxin does not define disease
- Contact precautions and soap-and-water hand hygiene (alcohol does not inactivate the spore)
Clinical Notes
Clinical presentations
- Causes antibiotic-associated diarrhea, ranging from mild self-limited disease to severe pseudomembranous colitis.
- Severe complications include toxic megacolon, intestinal perforation, and septic shock in fulminant cases.
- Infection recurrence occurs in a significant proportion of patients after treatment of the initial episode.
Specimens and collection
- Unformed (liquid or soft) stool specimen is mandatory for testing, as formed stool indicates colonization only.
- Diagnostic algorithm combining glutamate dehydrogenase (GDH) testing, toxin immunoassay, and/or PCR increases diagnostic accuracy.
- Test of cure is not recommended, as PCR may remain positive after clinical symptom resolution.
Epidemiology and at-risk populations
- Prior broad-spectrum antimicrobial use is the main risk factor, due to disruption of the protective intestinal microbiota.
- Advanced age, prolonged hospitalization, and proton pump inhibitor use increase infection risk.
- The hypervirulent ribotype 027 strain is associated with hospital outbreaks with higher morbidity and mortality.
Resistance and therapeutic implications
- Oral vancomycin and fidaxomicin are the first-line treatments recommended by current guidelines, with fidaxomicin associated with lower recurrence.
- Metronidazole is currently reserved for mild cases when preferred therapies are unavailable.
- Fecal microbiota transplantation is an established therapeutic option for multiple recurrent infection.
Bench and reporting notes
- Molecular tests (PCR) detect toxin genes with high sensitivity but do not distinguish colonization from active disease, requiring clinical correlation.
- Toxigenic culture is considered the reference standard in research settings but rarely used in routine clinical practice due to turnaround time.
- Positive result should be interpreted in the clinical context of active diarrhea to avoid treating asymptomatic colonization.
Sources
- CDC — C. diff infection
- IDSA/SHEA — Clinical practice guidelines for C. difficile infection
- EUCAST — Clinical breakpoints
Educational decision-support content. It does not replace laboratory validation, current guidelines or review by the responsible professional.
FAQ: Frequently Asked Questions
How to identify Clostridioides difficile in the lab?
Clostridioides difficile is identified through strict anaerobe, subterminal spore, routine diagnosis by gdh plus toxin a/b testing, with confirmatory pcr.
What are the intrinsic resistances of Clostridioides difficile?
This organism is naturally resistant to cephalosporins, aztreonam, aminoglycosides. These drugs should not be reported as susceptible.
Where is Clostridioides difficile commonly found?
It is typically associated with antibiotic-associated diarrhea and pseudomembranous colitis in hospitalized patients.
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